Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm40466-201ENSMUST00000212174 422 ntBASIC10.97□□□□□ -0.65
Trim40Q3UWA4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.97□□□□□ -0.65
Trim40Q3UWA4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Gm4984-201ENSMUST00000115987 360 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Gm27023-201ENSMUST00000182372 285 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Gm29127-201ENSMUST00000188304 517 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Lect2-202ENSMUST00000225183 823 ntBASIC10.96□□□□□ -0.65
Trim40Q3UWA4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim40Q3UWA4 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim40Q3UWA4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim40Q3UWA4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms