Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.97□□□□□ -0.81
Znf48Q3US17 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm13875-201ENSMUST00000120162 282 ntBASIC9.97□□□□□ -0.81
Znf48Q3US17 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm27438-201ENSMUST00000183480 110 ntBASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm44405-201ENSMUST00000198952 126 ntBASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 AC140368.1-202ENSMUST00000226131 658 ntBASIC9.97□□□□□ -0.81
Znf48Q3US17 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.97□□□□□ -0.81
Znf48Q3US17 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Znf48Q3US17 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.97□□□□□ -0.81
Znf48Q3US17 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.96□□□□□ -0.81
Znf48Q3US17 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.96□□□□□ -0.81
Znf48Q3US17 Daam2-202ENSMUST00000224595 1926 ntBASIC9.96□□□□□ -0.81
Znf48Q3US17 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Znf48Q3US17 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Znf48Q3US17 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Znf48Q3US17 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Znf48Q3US17 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Znf48Q3US17 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Znf48Q3US17 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Znf48Q3US17 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Znf48Q3US17 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Znf48Q3US17 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.96□□□□□ -0.82
Znf48Q3US17 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.96□□□□□ -0.82
Znf48Q3US17 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.96□□□□□ -0.82
Znf48Q3US17 Gm13792-201ENSMUST00000121350 423 ntBASIC9.96□□□□□ -0.82
Znf48Q3US17 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Znf48Q3US17 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.96□□□□□ -0.82
Znf48Q3US17 Gm22094-201ENSMUST00000158976 117 ntBASIC9.96□□□□□ -0.82
Znf48Q3US17 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Znf48Q3US17 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms