Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Gm43002-201ENSMUST00000200310 155 ntBASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Gm8913-201ENSMUST00000209491 641 ntBASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.03□□□□□ -0.64
Brf2Q3UAW9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Brf2Q3UAW9 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Brf2Q3UAW9 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Gm14130-201ENSMUST00000118417 987 ntBASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Gm13996-201ENSMUST00000118456 430 ntBASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.02□□□□□ -0.65
Brf2Q3UAW9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.02□□□□□ -0.65
Brf2Q3UAW9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms