Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp4Q3U4B1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Matn2-203ENSMUST00000226766 3252 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm11667-201ENSMUST00000119828 486 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm9463-201ENSMUST00000206707 601 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm2517-201ENSMUST00000215651 348 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.88□□□□□ -0.83
Ssbp4Q3U4B1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm11949-201ENSMUST00000117640 372 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm7150-201ENSMUST00000122032 981 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm24844-201ENSMUST00000158679 127 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm6485-201ENSMUST00000160676 439 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm21092-201ENSMUST00000178995 955 ntBASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.87□□□□□ -0.83
Ssbp4Q3U4B1 Gm9645-201ENSMUST00000197131 792 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms