Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cul4aQ3TCH7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cul4aQ3TCH7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm8343-201ENSMUST00000182705 994 ntBASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm38117-201ENSMUST00000194653 939 ntBASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm6334-201ENSMUST00000207083 228 ntBASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gm10478-201ENSMUST00000084451 396 ntBASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cul4aQ3TCH7 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms