Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Ebf1Q07802 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf1Q07802 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ebf1Q07802 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ebf1Q07802 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm13916-201ENSMUST00000117368 628 ntBASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm11340-201ENSMUST00000119226 412 ntBASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm6485-201ENSMUST00000160676 439 ntBASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm43520-201ENSMUST00000197996 164 ntBASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm44882-201ENSMUST00000205702 802 ntBASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf1Q07802 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.91□□□□□ -0.5
Ebf1Q07802 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.91□□□□□ -0.5
Ebf1Q07802 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.91□□□□□ -0.5
Ebf1Q07802 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf1Q07802 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ebf1Q07802 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf1Q07802 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ebf1Q07802 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ebf1Q07802 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ebf1Q07802 Gm15004-201ENSMUST00000119192 630 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Gm13182-201ENSMUST00000122241 312 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.9□□□□□ -0.5
Ebf1Q07802 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Gm5714-201ENSMUST00000197343 566 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ebf1Q07802 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Ebf1Q07802 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.9□□□□□ -0.5
Ebf1Q07802 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf1Q07802 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ebf1Q07802 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.9□□□□□ -0.5
Ebf1Q07802 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ebf1Q07802 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ebf1Q07802 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ebf1Q07802 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ebf1Q07802 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.9□□□□□ -0.51
Ebf1Q07802 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ebf1Q07802 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ebf1Q07802 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.89□□□□□ -0.51
Ebf1Q07802 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf1Q07802 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms