Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Col9a2Q07643 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col9a2Q07643 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm11700-201ENSMUST00000119409 403 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm38210-201ENSMUST00000191944 809 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm37028-201ENSMUST00000194276 107 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm5996-201ENSMUST00000211110 718 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm2875-201ENSMUST00000211333 360 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col9a2Q07643 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.66□□□□□ -0.38
Col9a2Q07643 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm12247-201ENSMUST00000117585 670 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Mir1901-201ENSMUST00000122616 78 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm25492-201ENSMUST00000157383 129 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Lect2-202ENSMUST00000225183 823 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Col9a2Q07643 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Col9a2Q07643 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.65□□□□□ -0.38
Col9a2Q07643 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a2Q07643 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col9a2Q07643 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col9a2Q07643 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col9a2Q07643 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col9a2Q07643 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col9a2Q07643 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.64□□□□□ -0.39
Col9a2Q07643 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms