Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm13263-201ENSMUST00000121271 838 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm8199-201ENSMUST00000121323 823 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm9797-202ENSMUST00000218003 294 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.11□□□□□ -0.63
Nkx3-2P97503 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx3-2P97503 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Cog3-203ENSMUST00000227473 4197 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gm13809-201ENSMUST00000117921 597 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Mir1943-201ENSMUST00000158276 73 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms