Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.87□□□□□ -0.35
Lig3P97386 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lig3P97386 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lig3P97386 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Gm7851-201ENSMUST00000117574 323 ntBASIC12.87□□□□□ -0.35
Lig3P97386 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lig3P97386 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.87□□□□□ -0.35
Lig3P97386 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Rmrp-201ENSMUST00000157463 271 ntBASIC12.87□□□□□ -0.35
Lig3P97386 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.87□□□□□ -0.35
Lig3P97386 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lig3P97386 Gm23153-201ENSMUST00000175323 313 ntBASIC12.87□□□□□ -0.35
Lig3P97386 Gm8492-201ENSMUST00000182375 987 ntBASIC12.87□□□□□ -0.35
Lig3P97386 Gm18038-201ENSMUST00000197900 485 ntBASIC12.87□□□□□ -0.35
Lig3P97386 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lig3P97386 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.87□□□□□ -0.35
Lig3P97386 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.87□□□□□ -0.35
Lig3P97386 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Mir339-201ENSMUST00000083659 96 ntBASIC12.87□□□□□ -0.35
Lig3P97386 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lig3P97386 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lig3P97386 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Lig3P97386 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lig3P97386 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.87□□□□□ -0.35
Lig3P97386 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.87□□□□□ -0.35
Lig3P97386 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.86□□□□□ -0.35
Lig3P97386 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.86□□□□□ -0.35
Lig3P97386 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Lig3P97386 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.86□□□□□ -0.35
Lig3P97386 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 Gm25072-201ENSMUST00000175233 235 ntBASIC12.86□□□□□ -0.35
Lig3P97386 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Gm37246-201ENSMUST00000192665 835 ntBASIC12.86□□□□□ -0.35
Lig3P97386 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Lig3P97386 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.86□□□□□ -0.35
Lig3P97386 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.86□□□□□ -0.35
Lig3P97386 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.86□□□□□ -0.35
Lig3P97386 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.86□□□□□ -0.35
Lig3P97386 Gm9463-201ENSMUST00000206707 601 ntBASIC12.86□□□□□ -0.35
Lig3P97386 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Ginm1-202ENSMUST00000065124 300 ntBASIC12.86□□□□□ -0.35
Lig3P97386 Gm25517-201ENSMUST00000083865 134 ntBASIC12.86□□□□□ -0.35
Lig3P97386 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.86□□□□□ -0.35
Lig3P97386 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lig3P97386 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Lig3P97386 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms