Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Gm7851-201ENSMUST00000117574 323 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 Gm12217-201ENSMUST00000118858 696 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 Gm11783-201ENSMUST00000119549 885 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 Gm11450-201ENSMUST00000121144 333 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 Gm8815-201ENSMUST00000173809 620 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim43cP86449 Gm28450-201ENSMUST00000187349 638 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim43cP86449 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim43cP86449 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trim43cP86449 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.73□□□□□ -0.37
Trim43cP86449 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trim43cP86449 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim43cP86449 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim43cP86449 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Gm38151-201ENSMUST00000195085 289 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Gm7848-201ENSMUST00000210739 718 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Trim43cP86449 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trim43cP86449 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.72□□□□□ -0.37
Trim43cP86449 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43cP86449 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim43cP86449 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim43cP86449 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.71□□□□□ -0.37
Trim43cP86449 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43cP86449 Gm22711-201ENSMUST00000116890 133 ntBASIC12.71□□□□□ -0.37
Trim43cP86449 Gm13035-201ENSMUST00000117496 342 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms