Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Gm10012-201ENSMUST00000078252 192 ntBASIC11.54□□□□□ -0.56
Shox2P70390 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.54□□□□□ -0.56
Shox2P70390 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.53□□□□□ -0.56
Shox2P70390 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Shox2P70390 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.53□□□□□ -0.56
Shox2P70390 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Shox2P70390 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.53□□□□□ -0.56
Shox2P70390 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Shox2P70390 Gm24196-201ENSMUST00000179161 110 ntBASIC11.53□□□□□ -0.56
Shox2P70390 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.53□□□□□ -0.56
Shox2P70390 Gm5904-201ENSMUST00000210286 865 ntBASIC11.53□□□□□ -0.56
Shox2P70390 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Shox2P70390 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.53□□□□□ -0.56
Shox2P70390 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.53□□□□□ -0.56
Shox2P70390 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.53□□□□□ -0.56
Shox2P70390 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shox2P70390 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.52□□□□□ -0.56
Shox2P70390 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shox2P70390 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.52□□□□□ -0.56
Shox2P70390 Rims2-204ENSMUST00000226410 3685 ntBASIC11.52□□□□□ -0.56
Shox2P70390 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Gm12502-201ENSMUST00000120197 444 ntBASIC11.52□□□□□ -0.57
Shox2P70390 Mir1896-201ENSMUST00000122641 81 ntBASIC11.52□□□□□ -0.57
Shox2P70390 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.52□□□□□ -0.57
Shox2P70390 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.52□□□□□ -0.57
Shox2P70390 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms