Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm24749-201ENSMUST00000157838 343 ntBASIC12.09□□□□□ -0.47
Smad1P70340 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.09□□□□□ -0.47
Smad1P70340 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.09□□□□□ -0.47
Smad1P70340 Gm17931-201ENSMUST00000208132 634 ntBASIC12.09□□□□□ -0.47
Smad1P70340 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.09□□□□□ -0.47
Smad1P70340 Gm45770-201ENSMUST00000212105 616 ntBASIC12.09□□□□□ -0.47
Smad1P70340 Gm18730-201ENSMUST00000218038 343 ntBASIC12.09□□□□□ -0.47
Smad1P70340 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.09□□□□□ -0.47
Smad1P70340 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smad1P70340 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.09□□□□□ -0.47
Smad1P70340 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smad1P70340 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smad1P70340 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.08□□□□□ -0.47
Smad1P70340 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smad1P70340 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Smad1P70340 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smad1P70340 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Smad1P70340 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.08□□□□□ -0.48
Smad1P70340 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Smad1P70340 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.08□□□□□ -0.48
Smad1P70340 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.08□□□□□ -0.48
Smad1P70340 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.08□□□□□ -0.48
Smad1P70340 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.08□□□□□ -0.48
Smad1P70340 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.08□□□□□ -0.48
Smad1P70340 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Smad1P70340 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.08□□□□□ -0.48
Smad1P70340 Gm7003-201ENSMUST00000195089 312 ntBASIC12.08□□□□□ -0.48
Smad1P70340 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.08□□□□□ -0.48
Smad1P70340 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Smad1P70340 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smad1P70340 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.08□□□□□ -0.48
Smad1P70340 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smad1P70340 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smad1P70340 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Smad1P70340 Gm14665-201ENSMUST00000122294 557 ntBASIC12.07□□□□□ -0.48
Smad1P70340 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.07□□□□□ -0.48
Smad1P70340 Gm18734-201ENSMUST00000172937 808 ntBASIC12.07□□□□□ -0.48
Smad1P70340 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.07□□□□□ -0.48
Smad1P70340 Gm44545-201ENSMUST00000208262 746 ntBASIC12.07□□□□□ -0.48
Smad1P70340 Gm7848-201ENSMUST00000210739 718 ntBASIC12.07□□□□□ -0.48
Smad1P70340 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.07□□□□□ -0.48
Smad1P70340 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.07□□□□□ -0.48
Smad1P70340 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Smad1P70340 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.07□□□□□ -0.48
Smad1P70340 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smad1P70340 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.07□□□□□ -0.48
Smad1P70340 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms