Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Pdlim4P70271 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm15711-201ENSMUST00000118889 535 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm18038-201ENSMUST00000197900 485 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm5363-201ENSMUST00000211927 938 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.78□□□□□ -0.84
Pdlim4P70271 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Pdlim4P70271 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pdlim4P70271 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Pdlim4P70271 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.77□□□□□ -0.84
Pdlim4P70271 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Pdlim4P70271 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Pdlim4P70271 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Pdlim4P70271 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Pdlim4P70271 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.77□□□□□ -0.84
Pdlim4P70271 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.77□□□□□ -0.84
Pdlim4P70271 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Pdlim4P70271 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Pdlim4P70271 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Pdlim4P70271 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms