Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.59□□□□□ -0.55
Crnkl1P63154 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Crnkl1P63154 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Crnkl1P63154 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Crnkl1P63154 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.59□□□□□ -0.55
Crnkl1P63154 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Mir1938-201ENSMUST00000158746 100 ntBASIC11.59□□□□□ -0.55
Crnkl1P63154 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Gm27243-201ENSMUST00000183964 521 ntBASIC11.59□□□□□ -0.55
Crnkl1P63154 Gm43438-201ENSMUST00000198133 379 ntBASIC11.59□□□□□ -0.55
Crnkl1P63154 Gm43630-201ENSMUST00000201550 776 ntBASIC11.59□□□□□ -0.55
Crnkl1P63154 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.59□□□□□ -0.55
Crnkl1P63154 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.59□□□□□ -0.55
Crnkl1P63154 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Crnkl1P63154 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Crnkl1P63154 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.59□□□□□ -0.55
Crnkl1P63154 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Crnkl1P63154 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Crnkl1P63154 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Crnkl1P63154 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Crnkl1P63154 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Gm13392-201ENSMUST00000117708 150 ntBASIC11.58□□□□□ -0.56
Crnkl1P63154 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.58□□□□□ -0.56
Crnkl1P63154 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Gm43002-201ENSMUST00000200310 155 ntBASIC11.58□□□□□ -0.56
Crnkl1P63154 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.58□□□□□ -0.56
Crnkl1P63154 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.58□□□□□ -0.56
Crnkl1P63154 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Crnkl1P63154 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Crnkl1P63154 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.57□□□□□ -0.56
Crnkl1P63154 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.57□□□□□ -0.56
Crnkl1P63154 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.57□□□□□ -0.56
Crnkl1P63154 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Gm9136-201ENSMUST00000193368 454 ntBASIC11.57□□□□□ -0.56
Crnkl1P63154 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.57□□□□□ -0.56
Crnkl1P63154 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms