Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39P62892 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39P62892 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39P62892 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rpl39P62892 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC8.31□□□□□ -1.08
Rpl39P62892 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39P62892 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC8.31□□□□□ -1.08
Rpl39P62892 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39P62892 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC8.31□□□□□ -1.08
Rpl39P62892 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39P62892 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39P62892 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 AC165351.1-201ENSMUST00000219078 2020 ntBASIC8.31□□□□□ -1.08
Rpl39P62892 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Rpl39P62892 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Gm7809-201ENSMUST00000153199 742 ntBASIC8.31□□□□□ -1.08
Rpl39P62892 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC8.31□□□□□ -1.08
Rpl39P62892 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC8.31□□□□□ -1.08
Rpl39P62892 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC8.31□□□□□ -1.08
Rpl39P62892 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC8.31□□□□□ -1.08
Rpl39P62892 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Rpl39P62892 Gm807-202ENSMUST00000224929 408 ntBASIC8.31□□□□□ -1.08
Rpl39P62892 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39P62892 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39P62892 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.31□□□□□ -1.08
Rpl39P62892 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39P62892 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 Gm43579-201ENSMUST00000202387 1307 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC8.3□□□□□ -1.08
Rpl39P62892 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Rpl39P62892 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Rpl39P62892 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Gm6222-202ENSMUST00000182143 629 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 Gm3890-201ENSMUST00000182416 207 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 Gm29649-201ENSMUST00000185649 419 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC8.3□□□□□ -1.08
Rpl39P62892 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC8.3□□□□□ -1.08
Rpl39P62892 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC8.3□□□□□ -1.08
Rpl39P62892 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Lect2-202ENSMUST00000225183 823 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms