Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.07□□□□□ -0.64
Nup43P59235 Gm13461-201ENSMUST00000120980 662 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Gm8199-201ENSMUST00000121323 823 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.07□□□□□ -0.64
Nup43P59235 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.07□□□□□ -0.64
Nup43P59235 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.07□□□□□ -0.64
Nup43P59235 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.07□□□□□ -0.64
Nup43P59235 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Gm38314-201ENSMUST00000195709 625 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.07□□□□□ -0.64
Nup43P59235 Gm5714-201ENSMUST00000197343 566 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nup43P59235 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Nup43P59235 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nup43P59235 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Nup43P59235 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nup43P59235 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.06□□□□□ -0.64
Nup43P59235 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nup43P59235 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Nup43P59235 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Nup43P59235 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Nup43P59235 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Gm7851-201ENSMUST00000117574 323 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Gm11783-201ENSMUST00000119549 885 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Gm26047-201ENSMUST00000157308 113 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Gm16570-201ENSMUST00000161951 436 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Gm26047-202ENSMUST00000198840 115 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.06□□□□□ -0.64
Nup43P59235 Gm5369-201ENSMUST00000217499 588 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Gm7940-201ENSMUST00000218195 769 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nup43P59235 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.06□□□□□ -0.64
Nup43P59235 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Nup43P59235 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Nup43P59235 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Nup43P59235 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nup43P59235 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup43P59235 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.05□□□□□ -0.64
Nup43P59235 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.05□□□□□ -0.64
Nup43P59235 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms