Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.44□□□□□ -0.9
Sssca1P56873 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sssca1P56873 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.44□□□□□ -0.9
Sssca1P56873 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.44□□□□□ -0.9
Sssca1P56873 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.44□□□□□ -0.9
Sssca1P56873 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sssca1P56873 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Gm18893-201ENSMUST00000198416 943 ntBASIC9.44□□□□□ -0.9
Sssca1P56873 Gm6266-201ENSMUST00000203844 806 ntBASIC9.44□□□□□ -0.9
Sssca1P56873 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.44□□□□□ -0.9
Sssca1P56873 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.44□□□□□ -0.9
Sssca1P56873 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sssca1P56873 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sssca1P56873 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.44□□□□□ -0.9
Sssca1P56873 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.44□□□□□ -0.9
Sssca1P56873 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sssca1P56873 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.44□□□□□ -0.9
Sssca1P56873 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Erich3-203ENSMUST00000189969 3460 ntBASIC9.43□□□□□ -0.9
Sssca1P56873 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.43□□□□□ -0.9
Sssca1P56873 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.43□□□□□ -0.9
Sssca1P56873 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.43□□□□□ -0.9
Sssca1P56873 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm17150-201ENSMUST00000165577 381 ntBASIC9.43□□□□□ -0.9
Sssca1P56873 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm42627-201ENSMUST00000197347 224 ntBASIC9.43□□□□□ -0.9
Sssca1P56873 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm807-202ENSMUST00000224929 408 ntBASIC9.43□□□□□ -0.9
Sssca1P56873 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.43□□□□□ -0.9
Sssca1P56873 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Sssca1P56873 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.43□□□□□ -0.9
Sssca1P56873 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.43□□□□□ -0.9
Sssca1P56873 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sssca1P56873 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sssca1P56873 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms