Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.6□□□□□ -0.55
CtskP55097 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Gm26226-201ENSMUST00000082509 116 ntBASIC11.6□□□□□ -0.55
CtskP55097 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CtskP55097 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.6□□□□□ -0.55
CtskP55097 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CtskP55097 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.6□□□□□ -0.55
CtskP55097 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CtskP55097 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.6□□□□□ -0.55
CtskP55097 Map1b-203ENSMUST00000223725 2669 ntBASIC11.6□□□□□ -0.55
CtskP55097 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CtskP55097 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CtskP55097 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
CtskP55097 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.59□□□□□ -0.55
CtskP55097 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 Gm23912-201ENSMUST00000104687 87 ntBASIC11.59□□□□□ -0.55
CtskP55097 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 Gm13809-201ENSMUST00000117921 597 ntBASIC11.59□□□□□ -0.55
CtskP55097 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Gm15881-201ENSMUST00000148792 942 ntBASIC11.59□□□□□ -0.55
CtskP55097 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.59□□□□□ -0.55
CtskP55097 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Gm9630-201ENSMUST00000178304 885 ntBASIC11.59□□□□□ -0.55
CtskP55097 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CtskP55097 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.59□□□□□ -0.55
CtskP55097 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.59□□□□□ -0.55
CtskP55097 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.59□□□□□ -0.55
CtskP55097 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.59□□□□□ -0.55
CtskP55097 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CtskP55097 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.58□□□□□ -0.55
CtskP55097 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CtskP55097 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Gm12164-201ENSMUST00000121695 551 ntBASIC11.58□□□□□ -0.56
CtskP55097 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC11.58□□□□□ -0.56
CtskP55097 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CtskP55097 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.58□□□□□ -0.56
CtskP55097 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.58□□□□□ -0.56
CtskP55097 Gm8956-201ENSMUST00000203939 825 ntBASIC11.58□□□□□ -0.56
CtskP55097 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.58□□□□□ -0.56
CtskP55097 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.58□□□□□ -0.56
CtskP55097 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CtskP55097 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms