Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm9372-201ENSMUST00000168454 430 ntBASIC12.31□□□□□ -0.44
NcanP55066 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Gm21778-201ENSMUST00000178779 471 ntBASIC12.31□□□□□ -0.44
NcanP55066 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NcanP55066 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
NcanP55066 Gm21577-201ENSMUST00000190823 697 ntBASIC12.31□□□□□ -0.44
NcanP55066 Gm20802-201ENSMUST00000190832 698 ntBASIC12.31□□□□□ -0.44
NcanP55066 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.31□□□□□ -0.44
NcanP55066 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.31□□□□□ -0.44
NcanP55066 Gm6518-201ENSMUST00000208450 342 ntBASIC12.31□□□□□ -0.44
NcanP55066 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC12.31□□□□□ -0.44
NcanP55066 AC107752.1-201ENSMUST00000219362 469 ntBASIC12.31□□□□□ -0.44
NcanP55066 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.31□□□□□ -0.44
NcanP55066 AC154433.1-201ENSMUST00000224401 1183 ntBASIC12.31□□□□□ -0.44
NcanP55066 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.31□□□□□ -0.44
NcanP55066 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Gm5292-201ENSMUST00000073317 580 ntBASIC12.31□□□□□ -0.44
NcanP55066 Krtap6-3-201ENSMUST00000079151 444 ntBASIC12.31□□□□□ -0.44
NcanP55066 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
NcanP55066 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
NcanP55066 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NcanP55066 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NcanP55066 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Mir598-201ENSMUST00000102094 79 ntBASIC12.3□□□□□ -0.44
NcanP55066 Gm15617-201ENSMUST00000118973 771 ntBASIC12.3□□□□□ -0.44
NcanP55066 Gm8152-201ENSMUST00000120842 637 ntBASIC12.3□□□□□ -0.44
NcanP55066 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.3□□□□□ -0.44
NcanP55066 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Gm5205-201ENSMUST00000182253 1003 ntBASIC12.3□□□□□ -0.44
NcanP55066 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.3□□□□□ -0.44
NcanP55066 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
NcanP55066 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
NcanP55066 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.3□□□□□ -0.44
NcanP55066 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.3□□□□□ -0.44
NcanP55066 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.3□□□□□ -0.44
NcanP55066 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.3□□□□□ -0.44
NcanP55066 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.3□□□□□ -0.44
NcanP55066 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.3□□□□□ -0.44
NcanP55066 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NcanP55066 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
NcanP55066 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
NcanP55066 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.29□□□□□ -0.44
NcanP55066 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.29□□□□□ -0.44
NcanP55066 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Gm27826-201ENSMUST00000175282 255 ntBASIC12.29□□□□□ -0.44
NcanP55066 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.29□□□□□ -0.44
NcanP55066 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Gm8268-201ENSMUST00000209683 458 ntBASIC12.29□□□□□ -0.44
NcanP55066 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.29□□□□□ -0.44
NcanP55066 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.29□□□□□ -0.44
NcanP55066 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.29□□□□□ -0.44
NcanP55066 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NcanP55066 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms