Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cacnb3P54285 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacnb3P54285 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacnb3P54285 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cacnb3P54285 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacnb3P54285 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacnb3P54285 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacnb3P54285 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.62□□□□□ -0.23
Cacnb3P54285 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm14892-201ENSMUST00000117636 267 ntBASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm11960-201ENSMUST00000122068 925 ntBASIC13.62□□□□□ -0.23
Cacnb3P54285 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.62□□□□□ -0.23
Cacnb3P54285 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm18514-201ENSMUST00000218980 436 ntBASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.62□□□□□ -0.23
Cacnb3P54285 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Cacnb3P54285 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacnb3P54285 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm13422-201ENSMUST00000118834 504 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm13022-201ENSMUST00000121181 285 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.61□□□□□ -0.23
Cacnb3P54285 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm9135-201ENSMUST00000182963 990 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm39288-201ENSMUST00000210554 446 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm9111-201ENSMUST00000219394 709 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Cacnb3P54285 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cacnb3P54285 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cacnb3P54285 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacnb3P54285 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.61□□□□□ -0.23
Cacnb3P54285 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.6□□□□□ -0.23
Cacnb3P54285 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cacnb3P54285 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cacnb3P54285 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cacnb3P54285 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cacnb3P54285 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cacnb3P54285 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cacnb3P54285 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cacnb3P54285 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cacnb3P54285 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cacnb3P54285 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms