Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdx1P52946 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pdx1P52946 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdx1P52946 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdx1P52946 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.57□□□□□ -0.56
Pdx1P52946 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.57□□□□□ -0.56
Pdx1P52946 Gm13461-201ENSMUST00000120980 662 ntBASIC11.57□□□□□ -0.56
Pdx1P52946 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.57□□□□□ -0.56
Pdx1P52946 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.57□□□□□ -0.56
Pdx1P52946 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdx1P52946 Gm8815-201ENSMUST00000173809 620 ntBASIC11.57□□□□□ -0.56
Pdx1P52946 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdx1P52946 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdx1P52946 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.57□□□□□ -0.56
Pdx1P52946 Gm7848-201ENSMUST00000210739 718 ntBASIC11.57□□□□□ -0.56
Pdx1P52946 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.57□□□□□ -0.56
Pdx1P52946 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pdx1P52946 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdx1P52946 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdx1P52946 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pdx1P52946 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdx1P52946 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdx1P52946 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdx1P52946 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.56□□□□□ -0.56
Pdx1P52946 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pdx1P52946 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pdx1P52946 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pdx1P52946 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Pdx1P52946 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
Pdx1P52946 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Pdx1P52946 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Gm7851-201ENSMUST00000117574 323 ntBASIC11.56□□□□□ -0.56
Pdx1P52946 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.56□□□□□ -0.56
Pdx1P52946 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.56□□□□□ -0.56
Pdx1P52946 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.56□□□□□ -0.56
Pdx1P52946 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Pdx1P52946 Mir8093-201ENSMUST00000185043 137 ntBASIC11.56□□□□□ -0.56
Pdx1P52946 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pdx1P52946 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.56□□□□□ -0.56
Pdx1P52946 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.56□□□□□ -0.56
Pdx1P52946 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.56□□□□□ -0.56
Pdx1P52946 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 474.2 ms