Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.32□□□□□ -0.44
SftpdP50404 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SftpdP50404 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.32□□□□□ -0.44
SftpdP50404 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SftpdP50404 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.32□□□□□ -0.44
SftpdP50404 Gm11783-201ENSMUST00000119549 885 ntBASIC12.32□□□□□ -0.44
SftpdP50404 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.32□□□□□ -0.44
SftpdP50404 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 Gm18734-201ENSMUST00000172937 808 ntBASIC12.32□□□□□ -0.44
SftpdP50404 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Gm45113-201ENSMUST00000207518 165 ntBASIC12.32□□□□□ -0.44
SftpdP50404 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.32□□□□□ -0.44
SftpdP50404 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.32□□□□□ -0.44
SftpdP50404 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
SftpdP50404 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpdP50404 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SftpdP50404 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.31□□□□□ -0.44
SftpdP50404 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SftpdP50404 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SftpdP50404 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Gm24891-201ENSMUST00000104391 136 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SftpdP50404 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
SftpdP50404 Gm14058-201ENSMUST00000116082 735 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Gm13035-201ENSMUST00000117496 342 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Gm11450-201ENSMUST00000121144 333 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Gm8199-201ENSMUST00000121323 823 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SftpdP50404 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.31□□□□□ -0.44
SftpdP50404 Gm26047-201ENSMUST00000157308 113 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SftpdP50404 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SftpdP50404 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Gm26047-202ENSMUST00000198840 115 ntBASIC12.31□□□□□ -0.44
SftpdP50404 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.31□□□□□ -0.44
SftpdP50404 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.31□□□□□ -0.44
SftpdP50404 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SftpdP50404 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpdP50404 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.3□□□□□ -0.44
SftpdP50404 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms