Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.33□□□□□ -0.44
LmnaP48678 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LmnaP48678 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.33□□□□□ -0.44
LmnaP48678 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LmnaP48678 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Gm14921-201ENSMUST00000118643 908 ntBASIC12.33□□□□□ -0.44
LmnaP48678 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.33□□□□□ -0.44
LmnaP48678 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.33□□□□□ -0.44
LmnaP48678 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.33□□□□□ -0.44
LmnaP48678 Gm8018-201ENSMUST00000173536 789 ntBASIC12.33□□□□□ -0.44
LmnaP48678 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.33□□□□□ -0.44
LmnaP48678 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
LmnaP48678 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC12.33□□□□□ -0.44
LmnaP48678 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.33□□□□□ -0.44
LmnaP48678 Gm26035-201ENSMUST00000083065 308 ntBASIC12.33□□□□□ -0.44
LmnaP48678 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LmnaP48678 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.33□□□□□ -0.44
LmnaP48678 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
LmnaP48678 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.33□□□□□ -0.44
LmnaP48678 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LmnaP48678 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LmnaP48678 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
LmnaP48678 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.32□□□□□ -0.44
LmnaP48678 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.32□□□□□ -0.44
LmnaP48678 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Map1b-203ENSMUST00000223725 2669 ntBASIC12.32□□□□□ -0.44
LmnaP48678 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
LmnaP48678 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.32□□□□□ -0.44
LmnaP48678 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.32□□□□□ -0.44
LmnaP48678 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.32□□□□□ -0.44
LmnaP48678 Gm5616-201ENSMUST00000165252 384 ntBASIC12.32□□□□□ -0.44
LmnaP48678 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.32□□□□□ -0.44
LmnaP48678 Gm8741-201ENSMUST00000174736 384 ntBASIC12.32□□□□□ -0.44
LmnaP48678 Gm28882-201ENSMUST00000185504 314 ntBASIC12.32□□□□□ -0.44
LmnaP48678 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.32□□□□□ -0.44
LmnaP48678 Gm37246-201ENSMUST00000192665 835 ntBASIC12.32□□□□□ -0.44
LmnaP48678 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.32□□□□□ -0.44
LmnaP48678 Gm6649-201ENSMUST00000199743 1165 ntBASIC12.32□□□□□ -0.44
LmnaP48678 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.32□□□□□ -0.44
LmnaP48678 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.32□□□□□ -0.44
LmnaP48678 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LmnaP48678 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LmnaP48678 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LmnaP48678 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LmnaP48678 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LmnaP48678 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LmnaP48678 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.31□□□□□ -0.44
LmnaP48678 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.31□□□□□ -0.44
LmnaP48678 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.31□□□□□ -0.44
LmnaP48678 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms