Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm11450-201ENSMUST00000121144 333 ntBASIC10.72□□□□□ -0.69
Nkx2-2P42586 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm29199-201ENSMUST00000187766 775 ntBASIC10.72□□□□□ -0.69
Nkx2-2P42586 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.72□□□□□ -0.69
Nkx2-2P42586 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.72□□□□□ -0.69
Nkx2-2P42586 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.72□□□□□ -0.69
Nkx2-2P42586 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.72□□□□□ -0.69
Nkx2-2P42586 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm13916-201ENSMUST00000117368 628 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm13035-201ENSMUST00000117496 342 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm7851-201ENSMUST00000117574 323 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm14071-201ENSMUST00000117817 509 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm13461-201ENSMUST00000120980 662 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Gm43966-201ENSMUST00000203301 612 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.71□□□□□ -0.69
Nkx2-2P42586 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.71□□□□□ -0.69
Nkx2-2P42586 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-2P42586 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Nkx2-2P42586 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms