Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox6P40645 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox6P40645 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox6P40645 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Sox6P40645 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.01□□□□□ -0.65
Sox6P40645 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Sox6P40645 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Gm24255-201ENSMUST00000104481 128 ntBASIC11.01□□□□□ -0.65
Sox6P40645 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Gm24845-201ENSMUST00000158034 109 ntBASIC11.01□□□□□ -0.65
Sox6P40645 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox6P40645 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.01□□□□□ -0.65
Sox6P40645 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox6P40645 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.01□□□□□ -0.65
Sox6P40645 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.01□□□□□ -0.65
Sox6P40645 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sox6P40645 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox6P40645 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox6P40645 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Gm45428-201ENSMUST00000209619 1789 ntBASIC11□□□□□ -0.65
Sox6P40645 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Btrc-209ENSMUST00000224478 2194 ntBASIC11□□□□□ -0.65
Sox6P40645 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
Sox6P40645 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Sox6P40645 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Gm6015-201ENSMUST00000217493 1586 ntBASIC11□□□□□ -0.65
Sox6P40645 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11□□□□□ -0.65
Sox6P40645 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms