Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rfc1P35601 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfc1P35601 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Rfc1P35601 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfc1P35601 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfc1P35601 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rfc1P35601 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Rfc1P35601 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.33□□□□□ -0.44
Rfc1P35601 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Gm23119-201ENSMUST00000158610 140 ntBASIC12.33□□□□□ -0.44
Rfc1P35601 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.33□□□□□ -0.44
Rfc1P35601 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.33□□□□□ -0.44
Rfc1P35601 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.33□□□□□ -0.44
Rfc1P35601 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.33□□□□□ -0.44
Rfc1P35601 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rfc1P35601 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rfc1P35601 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rfc1P35601 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.33□□□□□ -0.44
Rfc1P35601 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rfc1P35601 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfc1P35601 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfc1P35601 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rfc1P35601 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfc1P35601 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfc1P35601 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rfc1P35601 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.32□□□□□ -0.44
Rfc1P35601 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rfc1P35601 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.32□□□□□ -0.44
Rfc1P35601 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.32□□□□□ -0.44
Rfc1P35601 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.32□□□□□ -0.44
Rfc1P35601 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.32□□□□□ -0.44
Rfc1P35601 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfc1P35601 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Rfc1P35601 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.32□□□□□ -0.44
Rfc1P35601 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfc1P35601 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.32□□□□□ -0.44
Rfc1P35601 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rfc1P35601 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfc1P35601 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.32□□□□□ -0.44
Rfc1P35601 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.32□□□□□ -0.44
Rfc1P35601 Gm6714-201ENSMUST00000218677 2330 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms