Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm12453-201ENSMUST00000121981 331 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm25604-201ENSMUST00000158359 133 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm39288-201ENSMUST00000210554 446 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm6390-201ENSMUST00000215034 589 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sftpa1P35242 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Sftpa1P35242 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Gm17192-201ENSMUST00000169031 511 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.82□□□□□ -0.68
Sftpa1P35242 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 Gm43163-201ENSMUST00000196571 442 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 Gm45856-201ENSMUST00000212752 416 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.82□□□□□ -0.68
Sftpa1P35242 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.82□□□□□ -0.68
Sftpa1P35242 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.82□□□□□ -0.68
Sftpa1P35242 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sftpa1P35242 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sftpa1P35242 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm5434-202ENSMUST00000222384 1451 ntBASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm5434-201ENSMUST00000071825 1451 ntBASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms