Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.08□□□□□ -0.8
Slc6a1P31648 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm13123-201ENSMUST00000122173 492 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm27572-201ENSMUST00000183702 255 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm3961-201ENSMUST00000204425 994 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm19309-201ENSMUST00000218295 205 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.08□□□□□ -0.8
Slc6a1P31648 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Slc6a1P31648 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Snord83b-201ENSMUST00000104546 94 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm9083-201ENSMUST00000120423 819 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm26185-201ENSMUST00000157692 266 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm38002-201ENSMUST00000193255 180 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm38266-201ENSMUST00000194931 421 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm37008-201ENSMUST00000195712 319 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms