Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vcam1P29533 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.41□□□□□ -0.26
Vcam1P29533 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Vcam1P29533 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
Vcam1P29533 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.41□□□□□ -0.26
Vcam1P29533 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vcam1P29533 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.41□□□□□ -0.26
Vcam1P29533 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.41□□□□□ -0.26
Vcam1P29533 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.41□□□□□ -0.26
Vcam1P29533 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.41□□□□□ -0.26
Vcam1P29533 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.41□□□□□ -0.26
Vcam1P29533 Mir7051-201ENSMUST00000184167 73 ntBASIC13.41□□□□□ -0.26
Vcam1P29533 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.41□□□□□ -0.26
Vcam1P29533 Gm45120-201ENSMUST00000208880 408 ntBASIC13.41□□□□□ -0.26
Vcam1P29533 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Vcam1P29533 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.41□□□□□ -0.26
Vcam1P29533 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.41□□□□□ -0.26
Vcam1P29533 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vcam1P29533 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vcam1P29533 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vcam1P29533 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vcam1P29533 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vcam1P29533 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Gm8111-201ENSMUST00000117659 987 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Gm6407-201ENSMUST00000176468 549 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Gm29067-201ENSMUST00000190821 470 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vcam1P29533 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vcam1P29533 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vcam1P29533 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Vcam1P29533 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.4□□□□□ -0.26
Vcam1P29533 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Vcam1P29533 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcam1P29533 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.4□□□□□ -0.26
Vcam1P29533 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.39□□□□□ -0.27
Vcam1P29533 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.39□□□□□ -0.27
Vcam1P29533 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Gm14219-201ENSMUST00000120414 288 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.39□□□□□ -0.27
Vcam1P29533 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms