Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nckap1P28660 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nckap1P28660 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm11836-201ENSMUST00000121022 441 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm3150-201ENSMUST00000166418 204 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm21092-201ENSMUST00000178995 955 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nckap1P28660 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Mir7076-201ENSMUST00000183519 74 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm28937-201ENSMUST00000185413 695 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm29400-201ENSMUST00000187208 695 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm28662-201ENSMUST00000188446 695 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm28251-201ENSMUST00000188835 695 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm37318-201ENSMUST00000194325 695 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm38017-201ENSMUST00000194768 695 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm38151-201ENSMUST00000195085 289 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm37287-201ENSMUST00000195449 695 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm37793-201ENSMUST00000195548 695 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm7600-201ENSMUST00000209657 785 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.7□□□□□ -0.54
Nckap1P28660 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nckap1P28660 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nckap1P28660 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.7□□□□□ -0.54
Nckap1P28660 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Nckap1P28660 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nckap1P28660 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.69□□□□□ -0.54
Nckap1P28660 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nckap1P28660 Gm11451-201ENSMUST00000118946 630 ntBASIC11.69□□□□□ -0.54
Nckap1P28660 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.69□□□□□ -0.54
Nckap1P28660 Gm24844-201ENSMUST00000158679 127 ntBASIC11.69□□□□□ -0.54
Nckap1P28660 Gm37299-201ENSMUST00000193951 826 ntBASIC11.69□□□□□ -0.54
Nckap1P28660 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.69□□□□□ -0.54
Nckap1P28660 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Gm44980-201ENSMUST00000205826 314 ntBASIC11.69□□□□□ -0.54
Nckap1P28660 Gm7940-201ENSMUST00000218195 769 ntBASIC11.69□□□□□ -0.54
Nckap1P28660 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.69□□□□□ -0.54
Nckap1P28660 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nckap1P28660 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.69□□□□□ -0.54
Nckap1P28660 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nckap1P28660 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nckap1P28660 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nckap1P28660 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Gm1848-201ENSMUST00000120711 789 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms