Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.87□□□□□ -0.67
Cd40lgP27548 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
Cd40lgP27548 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.87□□□□□ -0.67
Cd40lgP27548 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cd40lgP27548 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm37466-201ENSMUST00000195692 652 ntBASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm45186-201ENSMUST00000206874 478 ntBASIC10.87□□□□□ -0.67
Cd40lgP27548 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.87□□□□□ -0.67
Cd40lgP27548 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.87□□□□□ -0.67
Cd40lgP27548 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.87□□□□□ -0.67
Cd40lgP27548 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cd40lgP27548 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd40lgP27548 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cd40lgP27548 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm14028-201ENSMUST00000117434 479 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm12266-201ENSMUST00000120311 962 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm15610-201ENSMUST00000120584 195 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.86□□□□□ -0.67
Cd40lgP27548 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm24749-201ENSMUST00000157838 343 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm27341-201ENSMUST00000183570 106 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm43184-201ENSMUST00000197247 542 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm18038-201ENSMUST00000197900 485 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.86□□□□□ -0.67
Cd40lgP27548 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd40lgP27548 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Cd40lgP27548 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms