Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.27□□□□□ -0.61
BdnfP21237 AY702102-202ENSMUST00000194651 1173 ntBASIC11.27□□□□□ -0.61
BdnfP21237 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.27□□□□□ -0.61
BdnfP21237 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
BdnfP21237 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
BdnfP21237 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.27□□□□□ -0.61
BdnfP21237 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.27□□□□□ -0.61
BdnfP21237 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
BdnfP21237 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Gm12742-201ENSMUST00000117326 410 ntBASIC11.26□□□□□ -0.61
BdnfP21237 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.26□□□□□ -0.61
BdnfP21237 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.26□□□□□ -0.61
BdnfP21237 Gm17420-201ENSMUST00000164753 153 ntBASIC11.26□□□□□ -0.61
BdnfP21237 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.26□□□□□ -0.61
BdnfP21237 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
BdnfP21237 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.26□□□□□ -0.61
BdnfP21237 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.26□□□□□ -0.61
BdnfP21237 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.26□□□□□ -0.61
BdnfP21237 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC11.26□□□□□ -0.61
BdnfP21237 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.26□□□□□ -0.61
BdnfP21237 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.26□□□□□ -0.61
BdnfP21237 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
BdnfP21237 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BdnfP21237 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.25□□□□□ -0.61
BdnfP21237 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Gm14127-201ENSMUST00000117906 678 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Gm15610-201ENSMUST00000120584 195 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms