Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm27731-201ENSMUST00000185192 107 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm43118-201ENSMUST00000199149 775 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm8956-201ENSMUST00000203939 825 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.68□□□□□ -0.7
Hmgn1P18608 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hmgn1P18608 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hmgn1P18608 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.67□□□□□ -0.7
Hmgn1P18608 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm11511-201ENSMUST00000118146 540 ntBASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm4986-201ENSMUST00000119731 549 ntBASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.67□□□□□ -0.7
Hmgn1P18608 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Mospd4-201ENSMUST00000180618 576 ntBASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hmgn1P18608 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.67□□□□□ -0.7
Hmgn1P18608 Erich3-203ENSMUST00000189969 3460 ntBASIC10.67□□□□□ -0.7
Hmgn1P18608 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hmgn1P18608 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms