Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd48P18181 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd48P18181 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Cd48P18181 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.51□□□□□ -0.73
Cd48P18181 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Gm11930-201ENSMUST00000117788 190 ntBASIC10.51□□□□□ -0.73
Cd48P18181 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.51□□□□□ -0.73
Cd48P18181 Gm14726-201ENSMUST00000120623 896 ntBASIC10.51□□□□□ -0.73
Cd48P18181 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Gm14441-201ENSMUST00000121960 540 ntBASIC10.51□□□□□ -0.73
Cd48P18181 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.51□□□□□ -0.73
Cd48P18181 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.51□□□□□ -0.73
Cd48P18181 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Gm25857-201ENSMUST00000082788 129 ntBASIC10.51□□□□□ -0.73
Cd48P18181 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cd48P18181 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cd48P18181 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.51□□□□□ -0.73
Cd48P18181 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.51□□□□□ -0.73
Cd48P18181 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd48P18181 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cd48P18181 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.51□□□□□ -0.73
Cd48P18181 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
Cd48P18181 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cd48P18181 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Cd48P18181 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.5□□□□□ -0.73
Cd48P18181 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cd48P18181 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cd48P18181 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cd48P18181 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cd48P18181 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Gm11700-201ENSMUST00000119409 403 ntBASIC10.5□□□□□ -0.73
Cd48P18181 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.5□□□□□ -0.73
Cd48P18181 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Cd48P18181 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.5□□□□□ -0.73
Cd48P18181 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cd48P18181 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.5□□□□□ -0.73
Cd48P18181 Gm19287-201ENSMUST00000203190 358 ntBASIC10.5□□□□□ -0.73
Cd48P18181 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Gm18054-201ENSMUST00000207539 555 ntBASIC10.5□□□□□ -0.73
Cd48P18181 Gm9368-201ENSMUST00000219348 831 ntBASIC10.5□□□□□ -0.73
Cd48P18181 Gm8712-201ENSMUST00000221090 701 ntBASIC10.5□□□□□ -0.73
Cd48P18181 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.5□□□□□ -0.73
Cd48P18181 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cd48P18181 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cd48P18181 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms