Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Gm8343-201ENSMUST00000182705 994 ntBASIC11.3□□□□□ -0.6
Fv4P11370 Mir8093-201ENSMUST00000185043 137 ntBASIC11.3□□□□□ -0.6
Fv4P11370 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Gm38117-201ENSMUST00000194653 939 ntBASIC11.3□□□□□ -0.6
Fv4P11370 Gm38341-201ENSMUST00000195357 515 ntBASIC11.3□□□□□ -0.6
Fv4P11370 Gm38317-201ENSMUST00000195564 343 ntBASIC11.3□□□□□ -0.6
Fv4P11370 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.3□□□□□ -0.6
Fv4P11370 Rps4l-202ENSMUST00000204242 789 ntBASIC11.3□□□□□ -0.6
Fv4P11370 Gm45224-201ENSMUST00000208203 414 ntBASIC11.3□□□□□ -0.6
Fv4P11370 Gm4157-201ENSMUST00000211647 679 ntBASIC11.3□□□□□ -0.6
Fv4P11370 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.3□□□□□ -0.6
Fv4P11370 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Fv4P11370 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fv4P11370 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Fv4P11370 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.29□□□□□ -0.6
Fv4P11370 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Fv4P11370 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.29□□□□□ -0.6
Fv4P11370 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Gm14381-201ENSMUST00000122105 414 ntBASIC11.29□□□□□ -0.6
Fv4P11370 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Fv4P11370 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 Gm5616-201ENSMUST00000165252 384 ntBASIC11.29□□□□□ -0.6
Fv4P11370 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Gm8741-201ENSMUST00000174736 384 ntBASIC11.29□□□□□ -0.6
Fv4P11370 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.29□□□□□ -0.6
Fv4P11370 Gm17827-201ENSMUST00000211825 742 ntBASIC11.29□□□□□ -0.6
Fv4P11370 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Fv4P11370 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Fv4P11370 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.29□□□□□ -0.6
Fv4P11370 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fv4P11370 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Fv4P11370 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Fv4P11370 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Fv4P11370 Gm11500-201ENSMUST00000118237 601 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Gm13665-201ENSMUST00000120830 528 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Fv4P11370 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.28□□□□□ -0.6
Fv4P11370 Gm20482-202ENSMUST00000174729 825 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms