Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lire1P11260 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.23□□□□□ -0.61
Lire1P11260 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.23□□□□□ -0.61
Lire1P11260 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.23□□□□□ -0.61
Lire1P11260 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.23□□□□□ -0.61
Lire1P11260 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lire1P11260 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.23□□□□□ -0.61
Lire1P11260 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.23□□□□□ -0.61
Lire1P11260 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lire1P11260 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lire1P11260 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.23□□□□□ -0.61
Lire1P11260 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lire1P11260 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lire1P11260 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.23□□□□□ -0.61
Lire1P11260 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lire1P11260 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lire1P11260 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.23□□□□□ -0.61
Lire1P11260 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.23□□□□□ -0.61
Lire1P11260 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.23□□□□□ -0.61
Lire1P11260 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lire1P11260 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Cog3-203ENSMUST00000227473 4197 ntBASIC11.22□□□□□ -0.61
Lire1P11260 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Lire1P11260 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Lire1P11260 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.22□□□□□ -0.61
Lire1P11260 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.22□□□□□ -0.61
Lire1P11260 Gm14028-201ENSMUST00000117434 479 ntBASIC11.22□□□□□ -0.61
Lire1P11260 Gm7857-201ENSMUST00000117957 358 ntBASIC11.22□□□□□ -0.61
Lire1P11260 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.22□□□□□ -0.61
Lire1P11260 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.22□□□□□ -0.61
Lire1P11260 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.22□□□□□ -0.61
Lire1P11260 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Gm2546-201ENSMUST00000182630 991 ntBASIC11.22□□□□□ -0.61
Lire1P11260 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.22□□□□□ -0.61
Lire1P11260 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.22□□□□□ -0.61
Lire1P11260 AA914427-201ENSMUST00000193194 1166 ntBASIC11.22□□□□□ -0.61
Lire1P11260 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.22□□□□□ -0.61
Lire1P11260 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.22□□□□□ -0.61
Lire1P11260 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Lire1P11260 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Lire1P11260 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Lire1P11260 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.22□□□□□ -0.61
Lire1P11260 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.22□□□□□ -0.61
Lire1P11260 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lire1P11260 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC11.21□□□□□ -0.61
Lire1P11260 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lire1P11260 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lire1P11260 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.21□□□□□ -0.61
Lire1P11260 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.21□□□□□ -0.61
Lire1P11260 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lire1P11260 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lire1P11260 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lire1P11260 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.61
Lire1P11260 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.21□□□□□ -0.61
Lire1P11260 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.21□□□□□ -0.61
Lire1P11260 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.21□□□□□ -0.61
Lire1P11260 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lire1P11260 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lire1P11260 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Lire1P11260 Gm23270-201ENSMUST00000104055 131 ntBASIC11.21□□□□□ -0.61
Lire1P11260 Snord83b-201ENSMUST00000104546 94 ntBASIC11.21□□□□□ -0.61
Lire1P11260 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Lire1P11260 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lire1P11260 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
Lire1P11260 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.21□□□□□ -0.61
Lire1P11260 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lire1P11260 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.21□□□□□ -0.61
Lire1P11260 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms