Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.97□□□□□ -0.33
Hoxc6P10629 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.97□□□□□ -0.33
Hoxc6P10629 Gm42599-201ENSMUST00000201308 469 ntBASIC12.97□□□□□ -0.33
Hoxc6P10629 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Hoxc6P10629 Gm19640-201ENSMUST00000214849 464 ntBASIC12.97□□□□□ -0.33
Hoxc6P10629 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.97□□□□□ -0.33
Hoxc6P10629 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Hoxc6P10629 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc6P10629 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxc6P10629 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm14274-201ENSMUST00000117182 615 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm11979-201ENSMUST00000119629 743 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm17192-201ENSMUST00000169031 511 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm9081-201ENSMUST00000182346 991 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm18776-201ENSMUST00000188833 654 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm44647-201ENSMUST00000207402 428 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm6390-201ENSMUST00000215034 589 ntBASIC12.96□□□□□ -0.33
Hoxc6P10629 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hoxc6P10629 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc6P10629 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc6P10629 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc6P10629 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc6P10629 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc6P10629 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc6P10629 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Gm15549-201ENSMUST00000121595 622 ntBASIC12.95□□□□□ -0.34
Hoxc6P10629 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxc6P10629 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Gm5996-201ENSMUST00000211110 718 ntBASIC12.95□□□□□ -0.34
Hoxc6P10629 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxc6P10629 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms