Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Olfml3-204ENSMUST00000169286 874 ntBASIC12.4□□□□□ -0.42
Hoxc8P09025 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxc8P09025 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxc8P09025 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxc8P09025 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.4□□□□□ -0.42
Hoxc8P09025 Lect2-202ENSMUST00000225183 823 ntBASIC12.4□□□□□ -0.42
Hoxc8P09025 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.4□□□□□ -0.42
Hoxc8P09025 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc8P09025 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc8P09025 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.39□□□□□ -0.43
Hoxc8P09025 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxc8P09025 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Hoxc8P09025 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Gm20392-201ENSMUST00000173047 701 ntBASIC12.39□□□□□ -0.43
Hoxc8P09025 Gm18201-201ENSMUST00000174735 875 ntBASIC12.39□□□□□ -0.43
Hoxc8P09025 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Gm6390-201ENSMUST00000215034 589 ntBASIC12.39□□□□□ -0.43
Hoxc8P09025 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Id2-203ENSMUST00000222667 958 ntBASIC12.39□□□□□ -0.43
Hoxc8P09025 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.39□□□□□ -0.43
Hoxc8P09025 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.39□□□□□ -0.43
Hoxc8P09025 Gm8181-201ENSMUST00000062242 669 ntBASIC12.39□□□□□ -0.43
Hoxc8P09025 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxc8P09025 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Hoxc8P09025 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxc8P09025 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc8P09025 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc8P09025 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.38□□□□□ -0.43
Hoxc8P09025 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm24791-201ENSMUST00000104284 131 ntBASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm14497-201ENSMUST00000119537 580 ntBASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm19246-201ENSMUST00000173599 255 ntBASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm45500-201ENSMUST00000211676 803 ntBASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc8P09025 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.38□□□□□ -0.43
Hoxc8P09025 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms