Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Mir7032-201ENSMUST00000185154 79 ntBASIC12.42□□□□□ -0.42
TnfP06804 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TnfP06804 Gm43520-201ENSMUST00000197996 164 ntBASIC12.42□□□□□ -0.42
TnfP06804 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Gm8342-201ENSMUST00000209839 757 ntBASIC12.42□□□□□ -0.42
TnfP06804 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TnfP06804 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.42□□□□□ -0.42
TnfP06804 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TnfP06804 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
TnfP06804 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.42□□□□□ -0.42
TnfP06804 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.42□□□□□ -0.42
TnfP06804 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
TnfP06804 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.41□□□□□ -0.42
TnfP06804 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Paupar-201ENSMUST00000194826 3482 ntBASIC12.41□□□□□ -0.42
TnfP06804 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.41□□□□□ -0.42
TnfP06804 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Mir7076-201ENSMUST00000183519 74 ntBASIC12.41□□□□□ -0.42
TnfP06804 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TnfP06804 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.41□□□□□ -0.42
TnfP06804 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.41□□□□□ -0.42
TnfP06804 Gm7504-201ENSMUST00000201449 424 ntBASIC12.41□□□□□ -0.42
TnfP06804 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.41□□□□□ -0.42
TnfP06804 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.41□□□□□ -0.42
TnfP06804 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.41□□□□□ -0.42
TnfP06804 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TnfP06804 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TnfP06804 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TnfP06804 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TnfP06804 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
TnfP06804 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.4□□□□□ -0.42
TnfP06804 Gm15615-201ENSMUST00000118876 198 ntBASIC12.4□□□□□ -0.42
TnfP06804 Gm1848-201ENSMUST00000120711 789 ntBASIC12.4□□□□□ -0.42
TnfP06804 Gm11244-201ENSMUST00000121243 237 ntBASIC12.4□□□□□ -0.42
TnfP06804 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.4□□□□□ -0.42
TnfP06804 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TnfP06804 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.4□□□□□ -0.42
TnfP06804 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.4□□□□□ -0.42
TnfP06804 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.4□□□□□ -0.42
TnfP06804 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.4□□□□□ -0.42
TnfP06804 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TnfP06804 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
TnfP06804 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TnfP06804 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
TnfP06804 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms