Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Gm3150-201ENSMUST00000166418 204 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.04□□□□□ -0.48
Ptch2O35595 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 Gm12407-201ENSMUST00000180219 324 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 Mir6998-201ENSMUST00000183343 64 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ptch2O35595 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 Gm2553-201ENSMUST00000215986 605 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.04□□□□□ -0.48
Ptch2O35595 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ptch2O35595 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Ptch2O35595 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Ptch2O35595 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Ptch2O35595 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.04□□□□□ -0.48
Ptch2O35595 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ptch2O35595 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ptch2O35595 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ptch2O35595 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ptch2O35595 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.03□□□□□ -0.48
Ptch2O35595 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Gm11451-201ENSMUST00000118946 630 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Mir1901-201ENSMUST00000122616 78 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.03□□□□□ -0.48
Ptch2O35595 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.03□□□□□ -0.48
Ptch2O35595 Gm25072-201ENSMUST00000175233 235 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Gm23153-201ENSMUST00000175323 313 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Gm21092-201ENSMUST00000178995 955 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Gm8492-201ENSMUST00000182375 987 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Gm9358-201ENSMUST00000183067 927 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.03□□□□□ -0.48
Ptch2O35595 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Gm9136-201ENSMUST00000193368 454 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ptch2O35595 Gm43058-201ENSMUST00000197645 625 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.03□□□□□ -0.48
Ptch2O35595 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.03□□□□□ -0.48
Ptch2O35595 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.03□□□□□ -0.48
Ptch2O35595 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.03□□□□□ -0.48
Ptch2O35595 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ptch2O35595 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ptch2O35595 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ptch2O35595 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms