Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf2O35218 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cpsf2O35218 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf2O35218 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.54□□□□□ -0.4
Cpsf2O35218 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.54□□□□□ -0.4
Cpsf2O35218 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Gm12015-201ENSMUST00000117065 843 ntBASIC12.54□□□□□ -0.4
Cpsf2O35218 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Gm38241-201ENSMUST00000192641 898 ntBASIC12.54□□□□□ -0.4
Cpsf2O35218 Gm31256-201ENSMUST00000194705 506 ntBASIC12.54□□□□□ -0.4
Cpsf2O35218 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Gm10478-201ENSMUST00000084451 396 ntBASIC12.54□□□□□ -0.4
Cpsf2O35218 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cpsf2O35218 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf2O35218 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.53□□□□□ -0.4
Cpsf2O35218 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Gm12241-201ENSMUST00000118330 726 ntBASIC12.53□□□□□ -0.4
Cpsf2O35218 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Gm4607-201ENSMUST00000206649 577 ntBASIC12.53□□□□□ -0.4
Cpsf2O35218 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.53□□□□□ -0.4
Cpsf2O35218 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.53□□□□□ -0.4
Cpsf2O35218 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Rgr-203ENSMUST00000225070 4704 ntBASIC12.53□□□□□ -0.4
Cpsf2O35218 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf2O35218 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf2O35218 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf2O35218 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cpsf2O35218 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Cpsf2O35218 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf2O35218 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf2O35218 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.52□□□□□ -0.4
Cpsf2O35218 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf2O35218 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf2O35218 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Cpsf2O35218 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf2O35218 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms