Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Alx4O35137 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Alx4O35137 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.45□□□□□ -0.74
Alx4O35137 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Gm14127-201ENSMUST00000117906 678 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Gm14660-201ENSMUST00000119809 575 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.45□□□□□ -0.74
Alx4O35137 Gm27514-201ENSMUST00000183692 110 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Gm45784-201ENSMUST00000188360 142 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Gm18187-201ENSMUST00000196476 984 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Gm6266-201ENSMUST00000203844 806 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Gm8956-201ENSMUST00000203939 825 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Gm4607-201ENSMUST00000206649 577 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.45□□□□□ -0.74
Alx4O35137 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.45□□□□□ -0.74
Alx4O35137 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.45□□□□□ -0.74
Alx4O35137 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Alx4O35137 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Alx4O35137 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.45□□□□□ -0.74
Alx4O35137 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Alx4O35137 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Alx4O35137 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.44□□□□□ -0.74
Alx4O35137 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.44□□□□□ -0.74
Alx4O35137 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.44□□□□□ -0.74
Alx4O35137 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Alx4O35137 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.44□□□□□ -0.74
Alx4O35137 Gm15004-201ENSMUST00000119192 630 ntBASIC10.44□□□□□ -0.74
Alx4O35137 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.44□□□□□ -0.74
Alx4O35137 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Alx4O35137 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.44□□□□□ -0.74
Alx4O35137 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.44□□□□□ -0.74
Alx4O35137 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Gm10312-201ENSMUST00000078515 489 ntBASIC10.44□□□□□ -0.74
Alx4O35137 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Alx4O35137 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Alx4O35137 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Alx4O35137 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms