Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ebf3O08791 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf3O08791 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf3O08791 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Ebf3O08791 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf3O08791 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.21□□□□□ -0.46
Ebf3O08791 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf3O08791 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ebf3O08791 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.21□□□□□ -0.46
Ebf3O08791 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Ebf3O08791 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf3O08791 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf3O08791 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf3O08791 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Ebf3O08791 Gm13916-201ENSMUST00000117368 628 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Gm11949-201ENSMUST00000117640 372 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Gm8815-201ENSMUST00000173809 620 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Gm9358-201ENSMUST00000183067 927 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Mir6958-201ENSMUST00000184207 73 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Gm27390-201ENSMUST00000184516 176 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Gm34023-201ENSMUST00000195539 217 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.2□□□□□ -0.46
Ebf3O08791 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.2□□□□□ -0.46
Ebf3O08791 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ebf3O08791 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ebf3O08791 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.2□□□□□ -0.46
Ebf3O08791 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf3O08791 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.19□□□□□ -0.46
Ebf3O08791 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ebf3O08791 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ebf3O08791 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ebf3O08791 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.19□□□□□ -0.46
Ebf3O08791 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.19□□□□□ -0.46
Ebf3O08791 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.19□□□□□ -0.46
Ebf3O08791 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ebf3O08791 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.19□□□□□ -0.46
Ebf3O08791 Gm12579-201ENSMUST00000118040 783 ntBASIC12.19□□□□□ -0.46
Ebf3O08791 Gm15352-201ENSMUST00000118696 270 ntBASIC12.19□□□□□ -0.46
Ebf3O08791 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.19□□□□□ -0.46
Ebf3O08791 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.19□□□□□ -0.46
Ebf3O08791 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.19□□□□□ -0.46
Ebf3O08791 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.19□□□□□ -0.46
Ebf3O08791 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf3O08791 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms