Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh9F8VPK8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm15276-201ENSMUST00000145953 498 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm28937-201ENSMUST00000185413 695 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm29400-201ENSMUST00000187208 695 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm28662-201ENSMUST00000188446 695 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm28251-201ENSMUST00000188835 695 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm37318-201ENSMUST00000194325 695 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm38017-201ENSMUST00000194768 695 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm37287-201ENSMUST00000195449 695 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm37793-201ENSMUST00000195548 695 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm13097-201ENSMUST00000210722 397 ntBASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh9F8VPK8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms