Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gm37424-201ENSMUST00000191727 561 ntBASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm22018-201ENSMUST00000104357 131 ntBASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm5187-201ENSMUST00000117317 991 ntBASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh1F7BJK1 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh1F7BJK1 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh1F7BJK1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh1F7BJK1 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Pcdh1F7BJK1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh1F7BJK1 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh1F7BJK1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh1F7BJK1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Pcdh1F7BJK1 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms