Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc188F6WEU2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm8111-201ENSMUST00000117659 987 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm14227-201ENSMUST00000119431 629 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm23432-201ENSMUST00000157181 131 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm26119-201ENSMUST00000175601 104 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm24312-201ENSMUST00000178677 119 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm7928-201ENSMUST00000181249 701 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm40332-201ENSMUST00000199847 938 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm19228-201ENSMUST00000214030 717 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 AC164614.1-201ENSMUST00000216038 397 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm5194-201ENSMUST00000221457 742 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc188F6WEU2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc188F6WEU2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc188F6WEU2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc188F6WEU2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc188F6WEU2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc188F6WEU2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ccdc188F6WEU2 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.77□□□□□ -0.52
Ccdc188F6WEU2 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc188F6WEU2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Gm12774-201ENSMUST00000117881 416 ntBASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc188F6WEU2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms