Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4aE9Q735 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4aE9Q735 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4aE9Q735 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4aE9Q735 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ube4aE9Q735 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4aE9Q735 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ube4aE9Q735 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4aE9Q735 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4aE9Q735 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.02□□□□□ -0.16
Ube4aE9Q735 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.02□□□□□ -0.17
Ube4aE9Q735 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm12274-201ENSMUST00000120062 385 ntBASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm17709-201ENSMUST00000174536 1096 ntBASIC14.02□□□□□ -0.17
Ube4aE9Q735 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm23694-201ENSMUST00000179335 110 ntBASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm3726-201ENSMUST00000203110 785 ntBASIC14.02□□□□□ -0.17
Ube4aE9Q735 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4aE9Q735 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Gm25880-201ENSMUST00000104331 132 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 Gm21778-201ENSMUST00000178779 471 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Gm43380-201ENSMUST00000200421 220 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 Gm39288-201ENSMUST00000210554 446 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Gm5805-201ENSMUST00000072779 456 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.01□□□□□ -0.17
Ube4aE9Q735 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4aE9Q735 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Gm5740-201ENSMUST00000211003 1857 ntBASIC14□□□□□ -0.17
Ube4aE9Q735 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms