Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usf3B2RUQ2 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usf3B2RUQ2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usf3B2RUQ2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.82□□□□□ -0.84
Usf3B2RUQ2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Gm23153-201ENSMUST00000175323 313 ntBASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Gm8492-201ENSMUST00000182375 987 ntBASIC9.81□□□□□ -0.84
Usf3B2RUQ2 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.81□□□□□ -0.84
Usf3B2RUQ2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usf3B2RUQ2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.8□□□□□ -0.84
Usf3B2RUQ2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Gm24934-201ENSMUST00000103764 111 ntBASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Gm11989-201ENSMUST00000117240 672 ntBASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Gm11362-201ENSMUST00000118838 850 ntBASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Gm8100-201ENSMUST00000182906 988 ntBASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Gm34023-201ENSMUST00000195539 217 ntBASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms