Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brpf3B2KF05 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.98□□□□□ -0.33
Brpf3B2KF05 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.98□□□□□ -0.33
Brpf3B2KF05 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.98□□□□□ -0.33
Brpf3B2KF05 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brpf3B2KF05 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.97□□□□□ -0.33
Brpf3B2KF05 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Gm16379-201ENSMUST00000161469 348 ntBASIC12.97□□□□□ -0.33
Brpf3B2KF05 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Gm8762-201ENSMUST00000193486 339 ntBASIC12.97□□□□□ -0.33
Brpf3B2KF05 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.97□□□□□ -0.33
Brpf3B2KF05 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.97□□□□□ -0.33
Brpf3B2KF05 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brpf3B2KF05 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.96□□□□□ -0.33
Brpf3B2KF05 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Brpf3B2KF05 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.96□□□□□ -0.33
Brpf3B2KF05 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.96□□□□□ -0.33
Brpf3B2KF05 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.96□□□□□ -0.33
Brpf3B2KF05 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.96□□□□□ -0.33
Brpf3B2KF05 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.96□□□□□ -0.33
Brpf3B2KF05 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brpf3B2KF05 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms