Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Mir1894-201ENSMUST00000122802 81 ntBASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Gm26927-201ENSMUST00000182385 965 ntBASIC9.43□□□□□ -0.9
Gm12887B1AVM1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm12887B1AVM1 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Gm12887B1AVM1 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms